WormBase Tree Display for Variation: WBVar00171518
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WBVar00171518 | Name | Public_name | WBVar00171518 | ||
---|---|---|---|---|---|
Other_name | haw24768 | ||||
cewivar00184300 | |||||
T05C1.4b.1:c.262-6C>A | |||||
T05C1.4a.1:c.262-6C>A | |||||
HGVSg | CHROMOSOME_II:g.4504227G>T | ||||
Sequence_details | SMap | S_parent | Sequence | B0304 | |
Flanking_sequences | aggattatgttgaggatttcctgta | tttttaattgtttttttttcaaata | |||
Mapping_target | B0304 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020251 | |||
Transcript | T05C1.4b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | T05C1.4b.1:c.262-6C>A | ||||
Intron_number | 2/17 | ||||
T05C1.4a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | T05C1.4a.1:c.262-6C>A | ||||
Intron_number | 2/18 | ||||
Remark | [20081124 db] this Variation was previously named hw24768 | ||||
Method | WGS_Hawaiian_Waterston |