WormBase Tree Display for Variation: WBVar00171932
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WBVar00171932 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00171932 | |||
Other_name | pas35430 | ||||
haw25182 | |||||
cewivar00090218 | |||||
C34F11.3b.1:c.137-183T>A | |||||
C34F11.3c.1:c.137-301T>A | |||||
C34F11.3d.1:c.510T>A | |||||
C34F11.3a.1:c.137-301T>A | |||||
CE52391:p.Asn170Lys | |||||
HGVSg | CHROMOSOME_II:g.5204487T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C34F11 | |
Flanking_sequences | catctaagttgaaataaaattttag | gaagacgcagagaggaaacggtccc | |||
Mapping_target | C34F11 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01371627 | |||
WBVar00223654 | |||||
WBVar01239946 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016415 | |||
Transcript | C34F11.3d.1 (12) | ||||
C34F11.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F11.3a.1:c.137-301T>A | ||||
Intron_number | 3/13 | ||||
C34F11.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F11.3c.1:c.137-301T>A | ||||
Intron_number | 3/14 | ||||
C34F11.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C34F11.3b.1:c.137-183T>A | ||||
Intron_number | 2/15 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw25182 | ||||
Method | WGS_Hawaiian_Waterston |