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WormBase Tree Display for Variation: WBVar00171932

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Name Class

WBVar00171932EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00171932
Other_namepas35430
haw25182
cewivar00090218
C34F11.3b.1:c.137-183T>A
C34F11.3c.1:c.137-301T>A
C34F11.3d.1:c.510T>A
C34F11.3a.1:c.137-301T>A
CE52391:p.Asn170Lys
HGVSgCHROMOSOME_II:g.5204487T>A
Sequence_detailsSMapS_parentSequenceC34F11
Flanking_sequencescatctaagttgaaataaaattttaggaagacgcagagaggaaacggtccc
Mapping_targetC34F11
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01371627
WBVar00223654
WBVar01239946
StatusLive
AffectsGeneWBGene00016415
TranscriptC34F11.3d.1 (12)
C34F11.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F11.3a.1:c.137-301T>A
Intron_number3/13
C34F11.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F11.3c.1:c.137-301T>A
Intron_number3/14
C34F11.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC34F11.3b.1:c.137-183T>A
Intron_number2/15
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw25182
MethodWGS_Hawaiian_Waterston