WormBase Tree Display for Variation: WBVar00171957

WBVar00171957 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00171957
    Other_name: haw25207
      cewivar00184548
      EGAP2.2.1:c.-6T>G
    HGVSg: CHROMOSOME_II:g.5230037T>G
  Sequence_details: SMap: S_parent: Sequence: EGAP2
    Flanking_sequences: aagcagaggaactggtggaagaacc aacagatgaagcaggtacagtgaaa
    Mapping_target: EGAP2
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00023192 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01371667
    Status: Live
  Affects: Gene: WBGene00017148
    Transcript: EGAP2.2.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: EGAP2.2.1:c.-6T>G
        cDNA_position: 142
        Exon_number: 1/4
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw25207
  Method: WGS_Hawaiian_Waterston