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WormBase Tree Display for Variation: WBVar00172253

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Name Class

WBVar00172253NamePublic_nameWBVar00172253
Other_namehaw25503
haw130798
cewivar00184704
F10C1.21:n.108A>T
HGVSgCHROMOSOME_II:g.5765294T>A
Sequence_detailsSMapS_parentSequenceF10C1
Flanking_sequencesactcaccatcatgtccttccacccaattcaattctgatttccatgaacaa
Mapping_targetF10C1
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023192From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01306367
WBVar00550663
WBVar01372049
StatusLive
AffectsGeneWBGene00219674
TranscriptF10C1.21VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScF10C1.21:n.108A>T
cDNA_position108
Exon_number1/1
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25503
MethodWGS_Hawaiian_Waterston