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WormBase Tree Display for Variation: WBVar00172285

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Name Class

WBVar00172285NamePublic_nameWBVar00172285
Other_namehaw25535
haw130813
cewivar00184727
ZK1248.16.1:c.836+5C>T
HGVSgCHROMOSOME_II:g.5839860G>A
Sequence_detailsSMapS_parentSequenceZK1248
Flanking_sequencestaaaatcagtaaaattaaggaatttaaacctttcattgttaaggaagatc
Mapping_targetZK1248
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01372087
WBVar00550678
StatusLive
AffectsGeneWBGene00002268
TranscriptZK1248.16.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScZK1248.16.1:c.836+5C>T
Intron_number6/7
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25535
MethodWGS_Hawaiian_Waterston