WormBase Tree Display for Variation: WBVar00172333

WBVar00172333 Name: Public_name: WBVar00172333
    Other_name: snp_F55C12[3]
      haw25583
      cewivar00184742
      F55C12.6.1:c.*90C>A
    HGVSg: CHROMOSOME_II:g.5874417G>T
  Sequence_details: SMap: S_parent: Sequence: F55C12
    Flanking_sequences: aaggtaaacacagagtagtaaaact aatgaaaataaggagacgcagacag
    Mapping_target: F55C12
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00245109
        WBVar01372149
    Status: Live
  Affects: Gene: WBGene00018873
    Transcript: F55C12.6.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F55C12.6.1:c.*90C>A
        cDNA_position: 1165
        Exon_number: 7/7
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw25583
  Method: WGS_Hawaiian_Waterston