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WormBase Tree Display for Variation: WBVar00172380

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Name Class

WBVar00172380NamePublic_nameWBVar00172380
Other_namehaw25630
haw130873
cewivar00184782
F28B12.2g.1:c.42+2710T>C
F28B12.2c.2:c.-1+2710T>C
F28B12.2h.1:c.42+2710T>C
F28B12.2b.2:c.-1+2710T>C
HGVSgCHROMOSOME_II:g.5931581T>C
Sequence_detailsSMapS_parentSequenceF28B12
Flanking_sequencestgagcaccgccaatctagatcatttgttccaacatccattctatcttttc
Mapping_targetF28B12
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01306585
WBVar01372204
WBVar00550738
StatusLive
AffectsGeneWBGene00001208
TranscriptF28B12.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B12.2g.1:c.42+2710T>C
Intron_number1/9
F28B12.2b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B12.2b.2:c.-1+2710T>C
Intron_number1/10
F28B12.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B12.2h.1:c.42+2710T>C
Intron_number1/9
F28B12.2c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF28B12.2c.2:c.-1+2710T>C
Intron_number1/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25630
MethodWGS_Hawaiian_Waterston