WormBase Tree Display for Variation: WBVar00172380
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WBVar00172380 | Name | Public_name | WBVar00172380 | ||
---|---|---|---|---|---|
Other_name | haw25630 | ||||
haw130873 | |||||
cewivar00184782 | |||||
F28B12.2g.1:c.42+2710T>C | |||||
F28B12.2c.2:c.-1+2710T>C | |||||
F28B12.2h.1:c.42+2710T>C | |||||
F28B12.2b.2:c.-1+2710T>C | |||||
HGVSg | CHROMOSOME_II:g.5931581T>C | ||||
Sequence_details | SMap | S_parent | Sequence | F28B12 | |
Flanking_sequences | tgagcaccgccaatctagatcattt | gttccaacatccattctatcttttc | |||
Mapping_target | F28B12 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01306585 | |||
WBVar01372204 | |||||
WBVar00550738 | |||||
Status | Live | ||||
Affects | Gene | WBGene00001208 | |||
Transcript | F28B12.2g.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F28B12.2g.1:c.42+2710T>C | ||||
Intron_number | 1/9 | ||||
F28B12.2b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F28B12.2b.2:c.-1+2710T>C | ||||
Intron_number | 1/10 | ||||
F28B12.2h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F28B12.2h.1:c.42+2710T>C | ||||
Intron_number | 1/9 | ||||
F28B12.2c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F28B12.2c.2:c.-1+2710T>C | ||||
Intron_number | 1/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw25630 | ||||
Method | WGS_Hawaiian_Waterston |