WormBase Tree Display for Variation: WBVar00172649
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WBVar00172649 | Name | Public_name | WBVar00172649 | ||
---|---|---|---|---|---|
Other_name | haw25899 | ||||
haw131056 | |||||
cewivar00185031 | |||||
K06A1.6c.1:c.193-969A>C | |||||
K06A1.6b.1:c.57+905A>C | |||||
HGVSg | CHROMOSOME_II:g.6468489T>G | ||||
Sequence_details | SMap | S_parent | Sequence | T28D9 | |
Flanking_sequences | gtaatcgaatgaagggaggatggaa | gaacgattttggtgacgacatggag | |||
Mapping_target | T28D9 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01372551 | |||
WBVar00550921 | |||||
Status | Live | ||||
Affects | Gene | WBGene00019428 | |||
Transcript | K06A1.6c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K06A1.6c.1:c.193-969A>C | ||||
Intron_number | 3/16 | ||||
K06A1.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A1.6b.1:c.57+905A>C | ||||
Intron_number | 2/15 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw25899 | ||||
Method | WGS_Hawaiian_Waterston |