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WormBase Tree Display for Variation: WBVar00172649

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Name Class

WBVar00172649NamePublic_nameWBVar00172649
Other_namehaw25899
haw131056
cewivar00185031
K06A1.6c.1:c.193-969A>C
K06A1.6b.1:c.57+905A>C
HGVSgCHROMOSOME_II:g.6468489T>G
Sequence_detailsSMapS_parentSequenceT28D9
Flanking_sequencesgtaatcgaatgaagggaggatggaagaacgattttggtgacgacatggag
Mapping_targetT28D9
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01372551
WBVar00550921
StatusLive
AffectsGeneWBGene00019428
TranscriptK06A1.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A1.6c.1:c.193-969A>C
Intron_number3/16
K06A1.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK06A1.6b.1:c.57+905A>C
Intron_number2/15
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw25899
MethodWGS_Hawaiian_Waterston