WormBase Tree Display for Variation: WBVar00172695
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WBVar00172695 | Name | Public_name | WBVar00172695 | ||
---|---|---|---|---|---|
Other_name | haw25945 | ||||
haw131090 | |||||
cewivar00013643 | |||||
T14B4.8c.1:c.125+200G>A | |||||
T14B4.8b.1:c.188+200G>A | |||||
T14B4.8a.2:c.-43-1958G>A | |||||
T14B4.8a.1:c.-44+200G>A | |||||
T14B4.8a.3:c.-44+200G>A | |||||
HGVSg | CHROMOSOME_II:g.6723621C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T14B4 | |
Flanking_sequences | gatgttcaaaaaattcaaaatcaat | gtttatcgaattttatgtaacaaaa | |||
Mapping_target | T14B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (41) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01372612 | |||
WBVar01240543 | |||||
WBVar00550955 | |||||
WBVar01306946 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020502 | |||
Transcript | T14B4.8b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T14B4.8b.1:c.188+200G>A | ||||
Intron_number | 2/6 | ||||
T14B4.8a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T14B4.8a.2:c.-43-1958G>A | ||||
Intron_number | 1/7 | ||||
T14B4.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T14B4.8c.1:c.125+200G>A | ||||
Intron_number | 1/5 | ||||
T14B4.8a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T14B4.8a.3:c.-44+200G>A | ||||
Intron_number | 1/7 | ||||
T14B4.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T14B4.8a.1:c.-44+200G>A | ||||
Intron_number | 2/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw25945 | ||||
Method | WGS_Hawaiian_Waterston |