WormBase Tree Display for Variation: WBVar00172747
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WBVar00172747 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00172747 | |||
Other_name | haw25997 | ||||
pas36876 | |||||
cewivar00090969 | |||||
F41G3.12.1:c.2563+54A>T | |||||
HGVSg | CHROMOSOME_II:g.6769564T>A | ||||
Sequence_details | SMap | S_parent | Sequence | T13C2 | |
Flanking_sequences | gaggtcccacaatgaaaaaaaaaac | acgtatcttttgttaatttttgaat | |||
Mapping_target | T13C2 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01372663 | |||
WBVar01240592 | |||||
WBVar00225100 | |||||
Status | Live | ||||
Affects | Gene | WBGene00018304 | |||
Transcript | F41G3.12.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F41G3.12.1:c.2563+54A>T | ||||
Intron_number | 16/30 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw25997 | ||||
Method | WGS_Hawaiian_Waterston |