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WormBase Tree Display for Variation: WBVar00172971

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Name Class

WBVar00172971NamePublic_nameWBVar00172971
Other_namepas37043
haw26221
haw131261
cewivar00091256
F22D3.2f.1:c.1019+166T>A
F22D3.2g.1:c.1019+166T>A
F22D3.2d.1:c.1019+166T>A
F22D3.2j.1:c.1010+166T>A
F22D3.2e.1:c.1010+166T>A
HGVSgCHROMOSOME_II:g.6934321T>A
Sequence_detailsSMapS_parentSequenceF22D3
Flanking_sequencesttgtatttcctcatttccttcatcttactttgactatttcatgattgaca
Mapping_targetF22D3
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00225267
WBVar01372960
WBVar01240911
WBVar01307291
WBVar00551126
StatusLive
AffectsGeneWBGene00017699
TranscriptF22D3.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2g.1:c.1019+166T>A
Intron_number12/18
F22D3.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2e.1:c.1010+166T>A
Intron_number12/18
F22D3.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2d.1:c.1019+166T>A
Intron_number12/18
F22D3.2f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2f.1:c.1019+166T>A
Intron_number10/10
F22D3.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF22D3.2j.1:c.1010+166T>A
Intron_number12/18
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw26221
MethodWGS_Hawaiian_Waterston