WormBase Tree Display for Variation: WBVar00173019
expand all nodes | collapse all nodes | view schema
WBVar00173019 | Name | Public_name | WBVar00173019 | ||
---|---|---|---|---|---|
Other_name | pas37284 | ||||
haw26269 | |||||
haw131288 | |||||
cewivar00091320 | |||||
C52E12.2b.1:c.4767+65A>G | |||||
C52E12.2a.2:c.4635+65A>G | |||||
C52E12.2a.1:c.4635+65A>G | |||||
HGVSg | CHROMOSOME_II:g.7009841A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C52E12 | |
Flanking_sequences | gataaccgagtgaagcctggcctca | ttttttcctcaattttgtatttcat | |||
Mapping_target | C52E12 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (33) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01373021 | |||
WBVar00551153 | |||||
WBVar00225508 | |||||
WBVar01240983 | |||||
WBVar01307363 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006831 | |||
Transcript | C52E12.2a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C52E12.2a.2:c.4635+65A>G | ||||
Intron_number | 22/23 | ||||
C52E12.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52E12.2b.1:c.4767+65A>G | ||||
Intron_number | 23/24 | ||||
C52E12.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C52E12.2a.1:c.4635+65A>G | ||||
Intron_number | 22/23 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw26269 | ||||
Method | WGS_Hawaiian_Waterston |