WormBase Tree Display for Variation: WBVar00173367
expand all nodes | collapse all nodes | view schema
WBVar00173367 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00173367 | |||
Other_name | pas37518 | ||||
haw26617 | |||||
cewivar00091752 | |||||
C07D10.2a.1:c.*117T>A | |||||
C07D10.2b.1:c.*117T>A | |||||
HGVSg | CHROMOSOME_II:g.7396925T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C07D10 | |
Flanking_sequences | taattaggcttctgtgttttttttt | aatatttaaataaccgtttgcatct | |||
Mapping_target | C07D10 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (22) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar01373475 | |||
WBVar01307824 | |||||
WBVar00225742 | |||||
Status | Live | ||||
Affects | Gene | WBGene00015567 | |||
Transcript | C07D10.2a.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C07D10.2a.1:c.*117T>A | ||||
cDNA_position | 1293 | ||||
Exon_number | 11/11 | ||||
C07D10.2b.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C07D10.2b.1:c.*117T>A | ||||
cDNA_position | 1314 | ||||
Exon_number | 11/11 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw26617 | ||||
Method | WGS_Hawaiian_Waterston |