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WormBase Tree Display for Variation: WBVar00174109

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Name Class

WBVar00174109NamePublic_nameWBVar00174109
Other_namehaw27359
haw131979
cewivar00185430
D2085.5b.1:c.-2096+11A>G
D2085.5k.1:c.177+11A>G
D2085.5b.2:c.-2053+11A>G
D2085.5l.1:c.153+11A>G
HGVSgCHROMOSOME_II:g.8684264T>C
Sequence_detailsSMapS_parentSequenceC34C6
Flanking_sequencesgacatttttatattaaatagcatattaaaactagcctcggtacttcgcct
Mapping_targetC34C6
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00551844
WBVar01374399
StatusLive
AffectsGeneWBGene00008430
TranscriptD2085.5b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2085.5b.2:c.-2053+11A>G
Intron_number2/25
D2085.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2085.5b.1:c.-2096+11A>G
Intron_number2/24
D2085.5k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2085.5k.1:c.177+11A>G
Intron_number2/23
D2085.5l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2085.5l.1:c.153+11A>G
Intron_number1/22
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw27359
MethodWGS_Hawaiian_Waterston