WormBase Tree Display for Variation: WBVar00174543
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| WBVar00174543 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00174543 | |||
| Other_name | haw27793 | ||||
| cewivar00185547 | |||||
| CE00863:p.Ile196= | |||||
| C01G6.1b.2:c.588C>A | |||||
| CE19664:p.Ile196= | |||||
| C01G6.1b.1:c.588C>A | |||||
| C01G6.1a.1:c.588C>A | |||||
| HGVSg | CHROMOSOME_II:g.9260591G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C01G6 | |
| Flanking_sequences | cgcagttgtatccgaaggcggctcc | atggcgacgaatccggttccgacaa | |||
| Mapping_target | C01G6 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01374953 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00000170 | |||
| Transcript | C01G6.1b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C01G6.1b.1:c.588C>A | ||||
| HGVSp | CE19664:p.Ile196= | ||||
| cDNA_position | 596 | ||||
| CDS_position | 588 | ||||
| Protein_position | 196 | ||||
| Exon_number | 4/8 | ||||
| Codon_change | atC/atA | ||||
| Amino_acid_change | I | ||||
| C01G6.1a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C01G6.1a.1:c.588C>A | ||||
| HGVSp | CE00863:p.Ile196= | ||||
| cDNA_position | 594 | ||||
| CDS_position | 588 | ||||
| Protein_position | 196 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | atC/atA | ||||
| Amino_acid_change | I | ||||
| C01G6.1b.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C01G6.1b.2:c.588C>A | ||||
| HGVSp | CE19664:p.Ile196= | ||||
| cDNA_position | 596 | ||||
| CDS_position | 588 | ||||
| Protein_position | 196 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | atC/atA | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw27793 | ||||
| Method | WGS_Hawaiian_Waterston |
