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WormBase Tree Display for Variation: WBVar00174571

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Name Class

WBVar00174571NamePublic_nameWBVar00174571
Other_namesnp_D2013[3]
haw27821
haw132301
cewivar00185567
D2013.8b.4:c.-193-104C>G
D2013.8b.2:c.-193-104C>G
D2013.8a.1:c.1794-104C>G
D2013.8b.3:c.-193-104C>G
HGVSgCHROMOSOME_II:g.9336865C>G
Sequence_detailsSMapS_parentSequenceD2013
Flanking_sequencesctgcgtctcctcgcataccgcacaattcttatggtttagaacattcgaga
Mapping_targetD2013
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar01374990
WBVar01309315
WBVar00552166
WBVar00243930
StatusLive
AffectsGeneWBGene00004744
TranscriptD2013.8b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2013.8b.3:c.-193-104C>G
Intron_number4/11
D2013.8b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2013.8b.4:c.-193-104C>G
Intron_number3/10
D2013.8b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2013.8b.2:c.-193-104C>G
Intron_number5/12
D2013.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScD2013.8a.1:c.1794-104C>G
Intron_number7/13
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw27821
MethodWGS_Hawaiian_Waterston