WormBase Tree Display for Variation: WBVar00174571
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WBVar00174571 | Name | Public_name | WBVar00174571 | ||
---|---|---|---|---|---|
Other_name | snp_D2013[3] | ||||
haw27821 | |||||
haw132301 | |||||
cewivar00185567 | |||||
D2013.8b.4:c.-193-104C>G | |||||
D2013.8b.2:c.-193-104C>G | |||||
D2013.8a.1:c.1794-104C>G | |||||
D2013.8b.3:c.-193-104C>G | |||||
HGVSg | CHROMOSOME_II:g.9336865C>G | ||||
Sequence_details | SMap | S_parent | Sequence | D2013 | |
Flanking_sequences | ctgcgtctcctcgcataccgcacaa | ttcttatggtttagaacattcgaga | |||
Mapping_target | D2013 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar01374990 | |||
WBVar01309315 | |||||
WBVar00552166 | |||||
WBVar00243930 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004744 | |||
Transcript | D2013.8b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | D2013.8b.3:c.-193-104C>G | ||||
Intron_number | 4/11 | ||||
D2013.8b.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D2013.8b.4:c.-193-104C>G | ||||
Intron_number | 3/10 | ||||
D2013.8b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D2013.8b.2:c.-193-104C>G | ||||
Intron_number | 5/12 | ||||
D2013.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D2013.8a.1:c.1794-104C>G | ||||
Intron_number | 7/13 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw27821 | ||||
Method | WGS_Hawaiian_Waterston |