WormBase Tree Display for Variation: WBVar00174830
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WBVar00174830 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00174830 | |||
Other_name | pas39926 | ||||
haw28080 | |||||
cewivar00093841 | |||||
F26C11.3d.1:c.319G>A | |||||
F26C11.3c.1:c.331+728G>A | |||||
F26C11.3b.1:c.335-2556G>A | |||||
CE54040:p.Ala107Thr | |||||
F26C11.3a.1:c.242-2556G>A | |||||
HGVSg | CHROMOSOME_II:g.9910979C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F26C11 | |
Flanking_sequences | gtgttctaaaactcacccaaatccg | agtggaaggctctaaagttgtcaag | |||
Mapping_target | F26C11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00228150 | |||
WBVar01243557 | |||||
WBVar01310174 | |||||
WBVar01375331 | |||||
Status | Live | ||||
Affects | Gene | WBGene00009147 | |||
Transcript | F26C11.3d.1 (12) | ||||
F26C11.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26C11.3c.1:c.331+728G>A | ||||
Intron_number | 1/26 | ||||
F26C11.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26C11.3b.1:c.335-2556G>A | ||||
Intron_number | 1/26 | ||||
F26C11.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F26C11.3a.1:c.242-2556G>A | ||||
Intron_number | 1/26 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw28080 | ||||
Method | WGS_Hawaiian_Waterston |