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WormBase Tree Display for Variation: WBVar00174830

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Name Class

WBVar00174830EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00174830
Other_namepas39926
haw28080
cewivar00093841
F26C11.3d.1:c.319G>A
F26C11.3c.1:c.331+728G>A
F26C11.3b.1:c.335-2556G>A
CE54040:p.Ala107Thr
F26C11.3a.1:c.242-2556G>A
HGVSgCHROMOSOME_II:g.9910979C>T
Sequence_detailsSMapS_parentSequenceF26C11
Flanking_sequencesgtgttctaaaactcacccaaatccgagtggaaggctctaaagttgtcaag
Mapping_targetF26C11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (36)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00228150
WBVar01243557
WBVar01310174
WBVar01375331
StatusLive
AffectsGeneWBGene00009147
TranscriptF26C11.3d.1 (12)
F26C11.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26C11.3c.1:c.331+728G>A
Intron_number1/26
F26C11.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26C11.3b.1:c.335-2556G>A
Intron_number1/26
F26C11.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF26C11.3a.1:c.242-2556G>A
Intron_number1/26
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw28080
MethodWGS_Hawaiian_Waterston