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WormBase Tree Display for Variation: WBVar00175376

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Name Class

WBVar00175376NamePublic_nameWBVar00175376
Other_namehaw28626
C52A11.4e.1:c.2095-954T>A
C52A11.4d.1:c.2809-954T>A
C52A11.4a.1:c.2722-954T>A
C52A11.4g.1:c.2095-954T>A
C52A11.4c.1:c.2149-954T>A
C52A11.4f.1:c.2722-954T>A
HGVSgCHROMOSOME_II:g.10755470A>T
Sequence_detailsSMapS_parentSequenceC52A11
Flanking_sequencesttctaaagagacaacaaaaagacgagccatgaaagaaagaaaaggagcgg
Mapping_targetC52A11
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00003404
TranscriptC52A11.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4c.1:c.2149-954T>A
Intron_number14/35
C52A11.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4f.1:c.2722-954T>A
Intron_number20/42
C52A11.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4g.1:c.2095-954T>A
Intron_number19/40
C52A11.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4e.1:c.2095-954T>A
Intron_number14/35
C52A11.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4d.1:c.2809-954T>A
Intron_number21/42
C52A11.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52A11.4a.1:c.2722-954T>A
Intron_number21/43
Remark[20081124 db] this Variation was previously named hw28626
MethodWGS_Hawaiian_Waterston