WormBase Tree Display for Variation: WBVar00175561
expand all nodes | collapse all nodes | view schema
| WBVar00175561 | Name | Public_name | WBVar00175561 | ||
|---|---|---|---|---|---|
| Other_name (14) | |||||
| HGVSg | CHROMOSOME_II:g.10988662A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C09D8 | |
| Flanking_sequences | tcatagcacaatggcattacaaaat | aagaactttccagctccactagaaa | |||
| Mapping_target | C09D8 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (37) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01244420 | |||
| WBVar00228744 | |||||
| WBVar01376322 | |||||
| WBVar00552842 | |||||
| WBVar01311270 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004215 | |||
| Transcript | C09D8.1j.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1j.1:c.2449+2626A>C | ||||
| Intron_number | 14/28 | ||||
| C09D8.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1e.1:c.1660+2626A>C | ||||
| Intron_number | 11/26 | ||||
| C09D8.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1i.1:c.2377+2626A>C | ||||
| Intron_number | 13/27 | ||||
| C09D8.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1a.1:c.2245+2626A>C | ||||
| Intron_number | 13/28 | ||||
| C09D8.1n.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1n.1:c.1330+2562A>C | ||||
| Intron_number | 10/24 | ||||
| C09D8.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1k.1:c.1915+2562A>C | ||||
| Intron_number | 13/27 | ||||
| C09D8.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1d.1:c.1732+2626A>C | ||||
| Intron_number | 11/25 | ||||
| C09D8.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1f.1:c.2317+2626A>C | ||||
| Intron_number | 14/28 | ||||
| C09D8.1m.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1m.1:c.1402+2562A>C | ||||
| Intron_number | 12/27 | ||||
| C09D8.1l.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09D8.1l.1:c.1987+2562A>C | ||||
| Intron_number | 14/29 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw28811 | ||||
| Method | WGS_Hawaiian_Waterston |
