WormBase Tree Display for Variation: WBVar00175603
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| WBVar00175603 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00175603 | |||
| Other_name | pas41606 | ||||
| haw28853 | |||||
| cewivar00094896 | |||||
| F45E10.1g.1:c.280+726C>T | |||||
| F45E10.1d.1:c.-123+726C>T | |||||
| F45E10.1h.1:c.280+726C>T | |||||
| F45E10.1b.1:c.280+726C>T | |||||
| F45E10.1c.1:c.280+726C>T | |||||
| F45E10.1a.1:c.280+726C>T | |||||
| HGVSg | CHROMOSOME_II:g.11077993G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C09H10 | |
| Flanking_sequences | aatactgttaagatttggaagtcga | ttttgtagccaaaagttagtcagaa | |||
| Mapping_target | C09H10 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (37) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01311366 | |||
| WBVar01244488 | |||||
| WBVar01376389 | |||||
| WBVar00229830 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006788 | |||
| Transcript | F45E10.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1c.1:c.280+726C>T | ||||
| Intron_number | 4/23 | ||||
| F45E10.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1b.1:c.280+726C>T | ||||
| Intron_number | 4/22 | ||||
| F45E10.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1d.1:c.-123+726C>T | ||||
| Intron_number | 1/20 | ||||
| F45E10.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1g.1:c.280+726C>T | ||||
| Intron_number | 4/21 | ||||
| F45E10.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1a.1:c.280+726C>T | ||||
| Intron_number | 5/23 | ||||
| F45E10.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E10.1h.1:c.280+726C>T | ||||
| Intron_number | 4/21 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw28853 | ||||
| Method | WGS_Hawaiian_Waterston |
