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WormBase Tree Display for Variation: WBVar00175965

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Name Class

WBVar00175965NamePublic_nameWBVar00175965
Other_namehaw29215
F54D5.15b.1:c.-191-340T>A
F54D5.15c.1:c.29-340T>A
F54D5.15a.1:c.35-340T>A
HGVSgCHROMOSOME_II:g.11563712A>T
Sequence_detailsSMapS_parentSequenceF54D5
Flanking_sequencesacatattttcttaaaatttttctttaaaaaaaacagcgtgcgcctttaaa
Mapping_targetF54D5
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00010057
TranscriptF54D5.15b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D5.15b.1:c.-191-340T>A
Intron_number1/10
F54D5.15a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D5.15a.1:c.35-340T>A
Intron_number2/10
F54D5.15c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF54D5.15c.1:c.29-340T>A
Intron_number1/8
Remark[20081124 db] this Variation was previously named hw29215
MethodWGS_Hawaiian_Waterston