WormBase Tree Display for Variation: WBVar00175965
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WBVar00175965 | Name | Public_name | WBVar00175965 | ||
---|---|---|---|---|---|
Other_name | haw29215 | ||||
F54D5.15b.1:c.-191-340T>A | |||||
F54D5.15c.1:c.29-340T>A | |||||
F54D5.15a.1:c.35-340T>A | |||||
HGVSg | CHROMOSOME_II:g.11563712A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F54D5 | |
Flanking_sequences | acatattttcttaaaatttttcttt | aaaaaaaacagcgtgcgcctttaaa | |||
Mapping_target | F54D5 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00010057 | |||
Transcript | F54D5.15b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54D5.15b.1:c.-191-340T>A | ||||
Intron_number | 1/10 | ||||
F54D5.15a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54D5.15a.1:c.35-340T>A | ||||
Intron_number | 2/10 | ||||
F54D5.15c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54D5.15c.1:c.29-340T>A | ||||
Intron_number | 1/8 | ||||
Remark | [20081124 db] this Variation was previously named hw29215 | ||||
Method | WGS_Hawaiian_Waterston |