WormBase Tree Display for Variation: WBVar00176324
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| WBVar00176324 | Name | Public_name | WBVar00176324 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_II:g.11924132A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y17G7A | |
| Flanking_sequences | tagatttaggctttggcttgggcct | tgcttaggctttgatttaggctcag | |||
| Mapping_target | Y17G7A | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00553440 | |||
| WBVar01377440 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003015 | |||
| Transcript | W03C9.4g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4g.1:c.382-2655T>A | ||||
| Intron_number | 3/9 | ||||
| W03C9.4h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4h.1:c.376-2655T>A | ||||
| Intron_number | 3/9 | ||||
| W03C9.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4b.1:c.376-2655T>A | ||||
| Intron_number | 5/12 | ||||
| W03C9.4e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4e.1:c.382-2655T>A | ||||
| Intron_number | 3/9 | ||||
| W03C9.4d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4d.1:c.376-2655T>A | ||||
| Intron_number | 3/9 | ||||
| W03C9.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4a.1:c.382-2655T>A | ||||
| Intron_number | 3/10 | ||||
| W03C9.4f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4f.1:c.376-2655T>A | ||||
| Intron_number | 3/9 | ||||
| W03C9.4i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W03C9.4i.1:c.382-2655T>A | ||||
| Intron_number | 3/9 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw29574 | ||||
| Method | WGS_Hawaiian_Waterston |
