WormBase Tree Display for Variation: WBVar00176639

WBVar00176639 Name: Public_name: WBVar00176639
    Other_name: pas42143
      uCE2-2063
      haw29889
      haw133793
      cewivar00096191
      Y17G7B.10a.1:c.-147-1018T>C
      Y17G7B.10a.4:c.-147-1018T>C
      Y17G7B.10a.2:c.-5-1838T>C
    HGVSg: CHROMOSOME_II:g.12053675T>C
  Sequence_details: SMap: S_parent: Sequence: Y17G7B
    Flanking_sequences: aagtgtccatctgaagtcgtagaga cgcatgaaacccgtagagcaccaga
    Mapping_target: Y17G7B
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (22)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Swan
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01377859
        WBVar00269096
        WBVar00230367
        WBVar00553658
    Status: Live
  Affects: Gene: WBGene00012463
    Transcript: Y17G7B.10a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.2:c.-5-1838T>C
        Intron_number: 1/8
      Y17G7B.10a.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.4:c.-147-1018T>C
        Intron_number: 1/10
      Y17G7B.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y17G7B.10a.1:c.-147-1018T>C
        Intron_number: 1/9
  Reference: WBPaper00038208
    WBPaper00037807
    WBPaper00005369
  Remark: [20081124 db] this Variation was previously named hw29889
  Method: WGS_Hawaiian_Waterston