WormBase Tree Display for Variation: WBVar00176660
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WBVar00176660 | Name | Public_name | WBVar00176660 | ||
---|---|---|---|---|---|
Other_name | haw29910 | ||||
haw133803 | |||||
cewivar00096216 | |||||
Y17G7B.10a.4:c.536+471A>T | |||||
Y17G7B.10b.1:c.719+471A>T | |||||
Y17G7B.10a.1:c.536+471A>T | |||||
Y17G7B.10a.6:c.536+471A>T | |||||
Y17G7B.10a.2:c.536+471A>T | |||||
Y17G7B.10a.5:c.536+471A>T | |||||
Y17G7B.10a.3:c.536+471A>T | |||||
HGVSg | CHROMOSOME_II:g.12056631A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | ttcgattacaaatgtattgtgaaaa | tacactaagccgagcttagcaaact | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (34) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01246272 | |||
WBVar01377879 | |||||
WBVar01313191 | |||||
WBVar00553668 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012463 | |||
Transcript | Y17G7B.10a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.2:c.536+471A>T | ||||
Intron_number | 5/8 | ||||
Y17G7B.10a.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.4:c.536+471A>T | ||||
Intron_number | 6/10 | ||||
Y17G7B.10a.6 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.6:c.536+471A>T | ||||
Intron_number | 4/7 | ||||
Y17G7B.10b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10b.1:c.719+471A>T | ||||
Intron_number | 6/8 | ||||
Y17G7B.10a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.3:c.536+471A>T | ||||
Intron_number | 6/9 | ||||
Y17G7B.10a.5 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.5:c.536+471A>T | ||||
Intron_number | 5/8 | ||||
Y17G7B.10a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.10a.1:c.536+471A>T | ||||
Intron_number | 6/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw29910 | ||||
Method | WGS_Hawaiian_Waterston |