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WormBase Tree Display for Variation: WBVar00177042

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Name Class

WBVar00177042EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00177042
Other_namehaw30292
cewivar00186647
Y57A10A.18a.2:c.3867+133G>A
Y57A10A.18c.1:c.3945+133G>A
Y57A10A.18d.1:c.3936+133G>A
Y57A10A.18e.1:c.3948+133G>A
Y57A10A.18a.1:c.3867+133G>A
Y57A10A.18b.1:c.3867+133G>A
HGVSgCHROMOSOME_II:g.12211657C>T
Sequence_detailsSMapS_parentSequenceY57A10A
Flanking_sequencescgttaaaaatcgtatttttctagttttttagcttaaaaattgtgattttc
Mapping_targetY57A10A
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01378363
StatusLive
AffectsGeneWBGene00004167
TranscriptY57A10A.18a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18a.2:c.3867+133G>A
Intron_number13/15
Y57A10A.18c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18c.1:c.3945+133G>A
Intron_number12/14
Y57A10A.18e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18e.1:c.3948+133G>A
Intron_number13/15
Y57A10A.18a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18a.1:c.3867+133G>A
Intron_number14/16
Y57A10A.18d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18d.1:c.3936+133G>A
Intron_number13/15
Y57A10A.18b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18b.1:c.3867+133G>A
Intron_number14/16
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw30292
MethodWGS_Hawaiian_Waterston