WormBase Tree Display for Variation: WBVar00177048
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WBVar00177048 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00177048 | |||
Other_name | haw30298 | ||||
cewivar00096655 | |||||
Y57A10A.18c.1:c.41+260T>A | |||||
Y57A10A.18a.1:c.41+260T>A | |||||
Y57A10A.18e.1:c.41+260T>A | |||||
Y57A10A.18a.2:c.41+260T>A | |||||
Y57A10A.18b.1:c.41+260T>A | |||||
Y57A10A.18d.1:c.41+260T>A | |||||
HGVSg | CHROMOSOME_II:g.12221333A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y57A10A | |
Flanking_sequences | tgagaggaaaatgtgaaaaatagtt | aattttctgtaatttttgtggaaaa | |||
Mapping_target | Y57A10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (31) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01246763 | |||
WBVar01313811 | |||||
WBVar01378373 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004167 | |||
Transcript | Y57A10A.18a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18a.2:c.41+260T>A | ||||
Intron_number | 2/15 | ||||
Y57A10A.18c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18c.1:c.41+260T>A | ||||
Intron_number | 1/14 | ||||
Y57A10A.18e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18e.1:c.41+260T>A | ||||
Intron_number | 2/15 | ||||
Y57A10A.18a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18a.1:c.41+260T>A | ||||
Intron_number | 3/16 | ||||
Y57A10A.18d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18d.1:c.41+260T>A | ||||
Intron_number | 2/15 | ||||
Y57A10A.18b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y57A10A.18b.1:c.41+260T>A | ||||
Intron_number | 3/16 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw30298 | ||||
Method | WGS_Hawaiian_Waterston |