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WormBase Tree Display for Variation: WBVar00177048

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Name Class

WBVar00177048EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00177048
Other_namehaw30298
cewivar00096655
Y57A10A.18c.1:c.41+260T>A
Y57A10A.18a.1:c.41+260T>A
Y57A10A.18e.1:c.41+260T>A
Y57A10A.18a.2:c.41+260T>A
Y57A10A.18b.1:c.41+260T>A
Y57A10A.18d.1:c.41+260T>A
HGVSgCHROMOSOME_II:g.12221333A>T
Sequence_detailsSMapS_parentSequenceY57A10A
Flanking_sequencestgagaggaaaatgtgaaaaatagttaattttctgtaatttttgtggaaaa
Mapping_targetY57A10A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (31)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01246763
WBVar01313811
WBVar01378373
StatusLive
AffectsGeneWBGene00004167
TranscriptY57A10A.18a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18a.2:c.41+260T>A
Intron_number2/15
Y57A10A.18c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18c.1:c.41+260T>A
Intron_number1/14
Y57A10A.18e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18e.1:c.41+260T>A
Intron_number2/15
Y57A10A.18a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18a.1:c.41+260T>A
Intron_number3/16
Y57A10A.18d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18d.1:c.41+260T>A
Intron_number2/15
Y57A10A.18b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57A10A.18b.1:c.41+260T>A
Intron_number3/16
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw30298
MethodWGS_Hawaiian_Waterston