WormBase Tree Display for Variation: WBVar00177691
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WBVar00177691 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00177691 | |||
Other_name | haw30941 | ||||
cewivar00187003 | |||||
F15A4.8c.1:n.1794T>A | |||||
F15A4.8a.1:n.1922T>A | |||||
F15A4.8b.1:n.1964T>A | |||||
HGVSg | CHROMOSOME_II:g.12476063A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F15A4 | |
Flanking_sequences | ccaaattgtagttttgcataaatgc | ggcacttgaattgagattagatact | |||
Mapping_target | F15A4 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01379298 | |||
Status | Live | ||||
Affects | Gene | WBGene00008842 | |||
Pseudogene | F15A4.8c | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F15A4.8c.1:n.1794T>A | ||||
cDNA_position | 1794 | ||||
Exon_number | 11/11 | ||||
F15A4.8b | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15A4.8b.1:n.1964T>A | ||||
cDNA_position | 1964 | ||||
Exon_number | 10/10 | ||||
F15A4.8a | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F15A4.8a.1:n.1922T>A | ||||
cDNA_position | 1922 | ||||
Exon_number | 9/9 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw30941 | ||||
Method | WGS_Hawaiian_Waterston |