WormBase Tree Display for Variation: WBVar00177961
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WBVar00177961 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00177961 | |||
Other_name | haw31211 | ||||
cewivar00015035 | |||||
Y38E10A.6b.1:c.2238+623A>T | |||||
Y38E10A.6a.1:c.2232+623A>T | |||||
HGVSg | CHROMOSOME_II:g.12589950T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | |
Flanking_sequences | attcgactgctttttggaaaaacaa | ttttttttttgaattttctcgattc | |||
Mapping_target | Y38E10A | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01379744 | |||
WBVar01248109 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012584 | |||
Transcript | Y38E10A.6b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.6b.1:c.2238+623A>T | ||||
Intron_number | 12/18 | ||||
Y38E10A.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38E10A.6a.1:c.2232+623A>T | ||||
Intron_number | 12/18 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw31211 | ||||
Method | WGS_Hawaiian_Waterston |