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WormBase Tree Display for Variation: WBVar00178058

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Name Class

WBVar00178058EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00178058
Other_namehaw45334
haw144811
cewivar00197331
CE00484:p.Ser59=
CE43529:p.Ser51=
C48B4.8b.1:c.153G>A
C48B4.8a.1:c.177G>A
HGVSgCHROMOSOME_III:g.9560646C>T
Sequence_detailsSMapS_parentSequenceC48B4
Flanking_sequencesggtgactcaccgagcaaagaaggatgaggcaagaatattggatgcttgga
Mapping_targetC48B4
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00564676
StatusLive
AffectsGeneWBGene00008171
TranscriptC48B4.8b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC48B4.8b.1:c.153G>A
HGVSpCE43529:p.Ser51=
cDNA_position153
CDS_position153
Protein_position51
Exon_number3/6
Codon_changetcG/tcA
Amino_acid_changeS
C48B4.8a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC48B4.8a.1:c.177G>A
HGVSpCE00484:p.Ser59=
cDNA_position199
CDS_position177
Protein_position59
Exon_number4/8
Codon_changetcG/tcA
Amino_acid_changeS
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw45334
MethodWGS_Hawaiian_Waterston