WormBase Tree Display for Variation: WBVar00178058
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WBVar00178058 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00178058 | |||
Other_name | haw45334 | ||||
haw144811 | |||||
cewivar00197331 | |||||
CE00484:p.Ser59= | |||||
CE43529:p.Ser51= | |||||
C48B4.8b.1:c.153G>A | |||||
C48B4.8a.1:c.177G>A | |||||
HGVSg | CHROMOSOME_III:g.9560646C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C48B4 | |
Flanking_sequences | ggtgactcaccgagcaaagaaggat | gaggcaagaatattggatgcttgga | |||
Mapping_target | C48B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00564676 | |||
Status | Live | ||||
Affects | Gene | WBGene00008171 | |||
Transcript | C48B4.8b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C48B4.8b.1:c.153G>A | ||||
HGVSp | CE43529:p.Ser51= | ||||
cDNA_position | 153 | ||||
CDS_position | 153 | ||||
Protein_position | 51 | ||||
Exon_number | 3/6 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
C48B4.8a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C48B4.8a.1:c.177G>A | ||||
HGVSp | CE00484:p.Ser59= | ||||
cDNA_position | 199 | ||||
CDS_position | 177 | ||||
Protein_position | 59 | ||||
Exon_number | 4/8 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw45334 | ||||
Method | WGS_Hawaiian_Waterston |