WormBase Tree Display for Variation: WBVar00178234
expand all nodes | collapse all nodes | view schema
WBVar00178234 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00178234 | |||
Other_name | haw45510 | ||||
haw144925 | |||||
cewivar00197413 | |||||
F40F12.7.2:c.*7-314T>G | |||||
K03H1.10.1:c.818+10T>G | |||||
K03H1.10.2:c.818+10T>G | |||||
HGVSg | CHROMOSOME_III:g.9924282T>G | ||||
Sequence_details | SMap | S_parent | Sequence | K03H1 | |
Flanking_sequences | gtggacatcagttaaggtagaaatg | aacatcaaaccatatataacatttt | |||
Mapping_target | K03H1 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00564790 | |||
Status | Live | ||||
Affects | Gene | WBGene00009595 | |||
WBGene00010545 | |||||
WBGene00305411 | |||||
WBGene00305410 | |||||
WBGene00305409 | |||||
Transcript | F40F12.13 | ||||
K03H1.10.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K03H1.10.1:c.818+10T>G | ||||
Intron_number | 5/7 | ||||
F40F12.12 | |||||
K03H1.10.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K03H1.10.2:c.818+10T>G | ||||
Intron_number | 5/6 | ||||
F40F12.14 | |||||
F40F12.7.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F40F12.7.2:c.*7-314T>G | ||||
Intron_number | 7/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw45510 | ||||
Method | WGS_Hawaiian_Waterston |