WormBase Tree Display for Variation: WBVar00178241

WBVar00178241 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00178241
    Other_name: pas27618
      haw45517
      cewivar00109660
      K03H1.9.2:c.-104T>C
      K03H1.9.3:c.-104T>C
      K03H1.9.1:c.-104T>C
    HGVSg: CHROMOSOME_III:g.9941394A>G
  Sequence_details: SMap: S_parent: Sequence: K03H1
    Flanking_sequences: cttctcccagattgatataggtatc gccactgaaaaatatgaattcaatg
    Mapping_target: K03H1
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (32)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01267370
        WBVar01332338
        WBVar00215842
    Status: Live
  Affects: Gene: WBGene00010544
    Transcript: K03H1.9.2 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K03H1.9.2:c.-104T>C
        cDNA_position: 35
        Exon_number: 2/5
      K03H1.9.3 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K03H1.9.3:c.-104T>C
        cDNA_position: 12
        Exon_number: 1/4
      K03H1.9.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: K03H1.9.1:c.-104T>C
        cDNA_position: 47
        Exon_number: 2/5
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw45517
  Method: WGS_Hawaiian_Waterston