WormBase Tree Display for Variation: WBVar00178537

WBVar00178537 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00178537
    Other_name: pas28166
      haw45813
      cewivar00023547
      CE47487:p.Phe596=
      C38H2.1b.1:c.1788C>T
      CE47567:p.Phe824=
      C38H2.1a.1:c.2472C>T
    HGVSg: CHROMOSOME_III:g.10372391C>T
  Sequence_details: SMap: S_parent: Sequence: C38H2
    Flanking_sequences: cttttagatggtttttgctggactt aaacgaggtgagcattacagtaatc
    Mapping_target: C38H2
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (22)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01332690
        WBVar00216390
        WBVar01267698
    Status: Live
  Affects: Gene: WBGene00008018
    Transcript: C38H2.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C38H2.1a.1:c.2472C>T
        HGVSp: CE47567:p.Phe824=
        cDNA_position: 2582
        CDS_position: 2472
        Protein_position: 824
        Exon_number: 17/20
        Codon_change: ttC/ttT
        Amino_acid_change: F
      C38H2.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C38H2.1b.1:c.1788C>T
        HGVSp: CE47487:p.Phe596=
        cDNA_position: 1788
        CDS_position: 1788
        Protein_position: 596
        Exon_number: 12/14
        Codon_change: ttC/ttT
        Amino_acid_change: F
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw45813
  Method: WGS_Hawaiian_Waterston