Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00178765

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00178765EvidencePaper_evidenceWBPaper00005369
NamePublic_nameWBVar00178765
Other_name (11)
HGVSgCHROMOSOME_III:g.10522580C>A
Sequence_detailsSMapS_parentSequenceT21C12
Flanking_sequencesaaaaacaggcaaaacaggcaaaaaaaggcaaaaacttatgtcaaaattta
Mapping_targetT21C12
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Swan
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Swan
HistoryAcquires_mergeWBVar00269990
StatusLive
AffectsGeneWBGene00006784
TranscriptT21C12.1k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1k.1:c.162-142C>A
Intron_number2/11
T21C12.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1c.1:c.162-142C>A
Intron_number3/18
T21C12.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1e.1:c.162-142C>A
Intron_number3/19
T21C12.1c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1c.2:c.162-142C>A
Intron_number3/14
T21C12.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1b.1:c.162-142C>A
Intron_number3/14
T21C12.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1j.1:c.162-142C>A
Intron_number2/5
T21C12.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1d.1:c.162-142C>A
Intron_number3/17
T21C12.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1f.1:c.162-142C>A
Intron_number3/11
ReferenceWBPaper00005369
Remark[20081124 db] this Variation was previously named hw46041
MethodWGS_Hawaiian_Waterston