WormBase Tree Display for Variation: WBVar00178765
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WBVar00178765 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00178765 | |||
Other_name (11) | |||||
HGVSg | CHROMOSOME_III:g.10522580C>A | ||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | |
Flanking_sequences | aaaaacaggcaaaacaggcaaaaaa | aggcaaaaacttatgtcaaaattta | |||
Mapping_target | T21C12 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00269990 | |||
Status | Live | ||||
Affects | Gene | WBGene00006784 | |||
Transcript | T21C12.1k.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1k.1:c.162-142C>A | ||||
Intron_number | 2/11 | ||||
T21C12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1c.1:c.162-142C>A | ||||
Intron_number | 3/18 | ||||
T21C12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1e.1:c.162-142C>A | ||||
Intron_number | 3/19 | ||||
T21C12.1c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1c.2:c.162-142C>A | ||||
Intron_number | 3/14 | ||||
T21C12.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1b.1:c.162-142C>A | ||||
Intron_number | 3/14 | ||||
T21C12.1j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1j.1:c.162-142C>A | ||||
Intron_number | 2/5 | ||||
T21C12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1d.1:c.162-142C>A | ||||
Intron_number | 3/17 | ||||
T21C12.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1f.1:c.162-142C>A | ||||
Intron_number | 3/11 | ||||
Reference | WBPaper00005369 | ||||
Remark | [20081124 db] this Variation was previously named hw46041 | ||||
Method | WGS_Hawaiian_Waterston |