WormBase Tree Display for Variation: WBVar00178822
expand all nodes | collapse all nodes | view schema
WBVar00178822 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00178822 | |||
Other_name | haw46098 | ||||
haw145340 | |||||
cewivar00197615 | |||||
Y45F3A.2.1:c.536+49T>C | |||||
Y45F3A.2.2:c.536+49T>C | |||||
HGVSg | CHROMOSOME_III:g.10564678T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y45F3A | |
Flanking_sequences | tttgagaaaaaatgacagaaaaaag | gaaaaaaacgagtttttagagaatc | |||
Mapping_target | Y45F3A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00565205 | |||
Status | Live | ||||
Affects | Gene | WBGene00004282 | |||
Transcript | Y45F3A.2.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y45F3A.2.2:c.536+49T>C | ||||
Intron_number | 8/9 | ||||
Y45F3A.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y45F3A.2.1:c.536+49T>C | ||||
Intron_number | 7/8 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw46098 | ||||
Method | WGS_Hawaiian_Waterston |