WormBase Tree Display for Variation: WBVar00178883

WBVar00178883 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00178883
    Other_name: pas28384
      haw46159
      cewivar00023924
      Y39A1A.5a.1:c.332+486G>A
      Y39A1A.5b.1:c.332+486G>A
    HGVSg: CHROMOSOME_III:g.10606781G>A
  Sequence_details: SMap: S_parent: Sequence: Y39A1A
    Flanking_sequences: gtcaaaaagtgggcaaaaaatctga aattagtggttgttgttgttttttg
    Mapping_target: Y39A1A
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (16)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00216608
        WBVar01333147
    Status: Live
  Affects: Gene: WBGene00012644
    Transcript: Y39A1A.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A1A.5b.1:c.332+486G>A
        Intron_number: 4/8
      Y39A1A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A1A.5a.1:c.332+486G>A
        Intron_number: 5/10
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw46159
  Method: WGS_Hawaiian_Waterston