WormBase Tree Display for Variation: WBVar00178885

WBVar00178885 Name: Public_name: WBVar00178885
    Other_name: snp_Y39A1A[1]
      haw46161
      haw145380
      cewivar00023926
      Y39A1A.5a.1:c.332+1461C>T
      Y39A1A.5b.1:c.332+1461C>T
    HGVSg: CHROMOSOME_III:g.10607756C>T
  Sequence_details: SMap: S_parent: Sequence: Y39A1A
    Flanking_sequences: tcgtattaatatgtacctgaaatct atttctaagataaagttcaattttg
    Mapping_target: Y39A1A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (14)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar01333149
        WBVar00565245
        WBVar01268115
        WBVar00247014
    Status: Live
  Affects: Gene: WBGene00012644
    Transcript: Y39A1A.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A1A.5b.1:c.332+1461C>T
        Intron_number: 4/8
      Y39A1A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y39A1A.5a.1:c.332+1461C>T
        Intron_number: 5/10
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw46161
  Method: WGS_Hawaiian_Waterston