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WormBase Tree Display for Variation: WBVar00179197

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Name Class

WBVar00179197NamePublic_nameWBVar00179197
Other_namehaw46473
cewivar00197734
Y39A1B.2c.1:c.2142-11C>T
Y39A1B.2a.1:c.2206-11C>T
HGVSgCHROMOSOME_III:g.10789798C>T
Sequence_detailsSMapS_parentSequenceY39A1B
Flanking_sequencesgaagttttcaagcttcttctcacaagaaattttaggtatccttctcgata
Mapping_targetY39A1B
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WGS_Hawaiian_Waterston
WBStrain00005301From_analysisWGS_Andersen
WBStrain00005311From_analysisWGS_Andersen
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01448348
WBVar01448349
StatusLive
AffectsGeneWBGene00004233
TranscriptY39A1B.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A1B.2a.1:c.2206-11C>T
Intron_number13/15
Y39A1B.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A1B.2c.1:c.2142-11C>T
Intron_number12/12
Remark[20081124 db] this Variation was previously named hw46473
MethodWGS_Hawaiian_Waterston