WormBase Tree Display for Variation: WBVar00179197
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WBVar00179197 | Name | Public_name | WBVar00179197 | ||
---|---|---|---|---|---|
Other_name | haw46473 | ||||
cewivar00197734 | |||||
Y39A1B.2c.1:c.2142-11C>T | |||||
Y39A1B.2a.1:c.2206-11C>T | |||||
HGVSg | CHROMOSOME_III:g.10789798C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A1B | |
Flanking_sequences | gaagttttcaagcttcttctcacaa | gaaattttaggtatccttctcgata | |||
Mapping_target | Y39A1B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Andersen | |||||
WGS_Hawaiian_Waterston | |||||
WBStrain00005301 | From_analysis | WGS_Andersen | |||
WBStrain00005311 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01448348 | |||
WBVar01448349 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004233 | |||
Transcript | Y39A1B.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A1B.2a.1:c.2206-11C>T | ||||
Intron_number | 13/15 | ||||
Y39A1B.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A1B.2c.1:c.2142-11C>T | ||||
Intron_number | 12/12 | ||||
Remark | [20081124 db] this Variation was previously named hw46473 | ||||
Method | WGS_Hawaiian_Waterston |