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WormBase Tree Display for Variation: WBVar00179199

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Name Class

WBVar00179199NamePublic_nameWBVar00179199
Other_namehaw46475
haw145588
cewivar00024279
Y39A1B.2a.1:c.2721C>T
CE19144:p.Ser907=
HGVSgCHROMOSOME_III:g.10790885C>T
Sequence_detailsSMapS_parentSequenceY39A1B
Flanking_sequencestctacacaatgccaccacctccaaggttgaatactctctttcaacactgg
Mapping_targetY39A1B
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (88)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01448351
WBVar00565453
WBVar01448350
WBVar01333524
WBVar01268490
StatusLive
AffectsGeneWBGene00004233
TranscriptY39A1B.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY39A1B.2a.1:c.2721C>T
HGVSpCE19144:p.Ser907=
cDNA_position2749
CDS_position2721
Protein_position907
Exon_number16/16
Codon_changeagC/agT
Amino_acid_changeS
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw46475
MethodWGS_Hawaiian_Waterston