WormBase Tree Display for Variation: WBVar00179199
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WBVar00179199 | Name | Public_name | WBVar00179199 | ||
---|---|---|---|---|---|
Other_name | haw46475 | ||||
haw145588 | |||||
cewivar00024279 | |||||
Y39A1B.2a.1:c.2721C>T | |||||
CE19144:p.Ser907= | |||||
HGVSg | CHROMOSOME_III:g.10790885C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A1B | |
Flanking_sequences | tctacacaatgccaccacctccaag | gttgaatactctctttcaacactgg | |||
Mapping_target | Y39A1B | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (88) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01448351 | |||
WBVar00565453 | |||||
WBVar01448350 | |||||
WBVar01333524 | |||||
WBVar01268490 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004233 | |||
Transcript | Y39A1B.2a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y39A1B.2a.1:c.2721C>T | ||||
HGVSp | CE19144:p.Ser907= | ||||
cDNA_position | 2749 | ||||
CDS_position | 2721 | ||||
Protein_position | 907 | ||||
Exon_number | 16/16 | ||||
Codon_change | agC/agT | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw46475 | ||||
Method | WGS_Hawaiian_Waterston |