WormBase Tree Display for Variation: WBVar00179411
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WBVar00179411 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00179411 | |||
Other_name | haw46687 | ||||
haw145731 | |||||
cewivar00024514 | |||||
Y52D3.2:n.12G>A | |||||
M142.6c.1:c.*43G>A | |||||
M142.6a.1:c.*43G>A | |||||
HGVSg | CHROMOSOME_III:g.10946542G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y52D3 | |
Flanking_sequences | atgatttttcccagtcgtggcctag | agttcacattttctaggccagcact | |||
Mapping_target | Y52D3 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00565596 | |||
Status | Live | ||||
Affects | Gene | WBGene00220178 | |||
WBGene00010923 | |||||
Transcript | Y52D3.2 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y52D3.2:n.12G>A | ||||
cDNA_position | 12 | ||||
Exon_number | 1/1 | ||||
M142.6c.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | M142.6c.1:c.*43G>A | ||||
cDNA_position | 3016 | ||||
Exon_number | 11/11 | ||||
M142.6a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | M142.6a.1:c.*43G>A | ||||
cDNA_position | 3074 | ||||
Exon_number | 11/11 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw46687 | ||||
Method | WGS_Hawaiian_Waterston |