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WormBase Tree Display for Variation: WBVar00179411

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Name Class

WBVar00179411EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00179411
Other_namehaw46687
haw145731
cewivar00024514
Y52D3.2:n.12G>A
M142.6c.1:c.*43G>A
M142.6a.1:c.*43G>A
HGVSgCHROMOSOME_III:g.10946542G>A
Sequence_detailsSMapS_parentSequenceY52D3
Flanking_sequencesatgatttttcccagtcgtggcctagagttcacattttctaggccagcact
Mapping_targetY52D3
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00565596
StatusLive
AffectsGeneWBGene00220178
WBGene00010923
TranscriptY52D3.2VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY52D3.2:n.12G>A
cDNA_position12
Exon_number1/1
M142.6c.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScM142.6c.1:c.*43G>A
cDNA_position3016
Exon_number11/11
M142.6a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScM142.6a.1:c.*43G>A
cDNA_position3074
Exon_number11/11
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw46687
MethodWGS_Hawaiian_Waterston