WormBase Tree Display for Variation: WBVar00179614
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WBVar00179614 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00179614 | |||
Other_name | haw46890 | ||||
haw145869 | |||||
cewivar00198040 | |||||
Y47D3A.23b.1:c.838-243C>T | |||||
Y47D3A.23a.1:c.1600-243C>T | |||||
HGVSg | CHROMOSOME_III:g.11280137G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y47D3A | |
Flanking_sequences | ttggattcatcgatttttatttgcg | aaaatcgatgaaaaataagtttatt | |||
Mapping_target | Y47D3A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00565734 | |||
Status | Live | ||||
Affects | Gene | WBGene00012934 | |||
Transcript | Y47D3A.23b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.23b.1:c.838-243C>T | ||||
Intron_number | 8/8 | ||||
Y47D3A.23a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.23a.1:c.1600-243C>T | ||||
Intron_number | 9/10 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw46890 | ||||
Method | WGS_Hawaiian_Waterston |