WormBase Tree Display for Variation: WBVar00179880

WBVar00179880 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00179880
    Other_name: snp_Y47D3B[8]
      haw47156
      cewivar00198280
      Y47D3B.5a.1:c.105-828T>A
      Y47D3B.5b.1:c.105-828T>A
    HGVSg: CHROMOSOME_III:g.11413496T>A
  Sequence_details: SMap: S_parent: Sequence: Y47D3B
    Flanking_sequences: aactcggcaagttcgtcaaatttgc atgatcgtcatactcggtaaatcac
    Mapping_target: Y47D3B
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00247321
    Status: Live
  Affects: Gene: WBGene00006683
    Transcript: Y47D3B.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47D3B.5b.1:c.105-828T>A
        Intron_number: 2/23
      Y47D3B.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y47D3B.5a.1:c.105-828T>A
        Intron_number: 1/23
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw47156
  Method: WGS_Hawaiian_Waterston