WormBase Tree Display for Variation: WBVar00179881
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| WBVar00179881 | Name | Public_name | WBVar00179881 | ||
|---|---|---|---|---|---|
| Other_name | haw47157 | ||||
| cewivar00198281 | |||||
| Y47D3B.5b.1:c.617+228A>T | |||||
| Y47D3B.5a.1:c.617+228A>T | |||||
| HGVSg | CHROMOSOME_III:g.11416139A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y47D3B | |
| Flanking_sequences | tggtagctcaaaattgaaaaaaaaa | tttttttaataaccaaaatgtgtgc | |||
| Mapping_target | Y47D3B | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (11) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006683 | |||
| Transcript | Y47D3B.5b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47D3B.5b.1:c.617+228A>T | ||||
| Intron_number | 6/23 | ||||
| Y47D3B.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y47D3B.5a.1:c.617+228A>T | ||||
| Intron_number | 5/23 | ||||
| Remark | [20081124 db] this Variation was previously named hw47157 | ||||
| Method | WGS_Hawaiian_Waterston |
