WormBase Tree Display for Variation: WBVar00179896
expand all nodes | collapse all nodes | view schema
WBVar00179896 | Name | Public_name | WBVar00179896 | ||
---|---|---|---|---|---|
Other_name | haw47172 | ||||
Y47D3B.5b.1:c.2406+237T>G | |||||
Y47D3B.5a.1:c.2406+237T>G | |||||
HGVSg | CHROMOSOME_III:g.11420873T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y47D3B | |
Flanking_sequences | ttgaaagtcgaccaaaaaaaaaagg | tttttttcctacatgttttatacta | |||
Mapping_target | Y47D3B | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00006683 | |||
Transcript | Y47D3B.5b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3B.5b.1:c.2406+237T>G | ||||
Intron_number | 18/23 | ||||
Y47D3B.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3B.5a.1:c.2406+237T>G | ||||
Intron_number | 17/23 | ||||
Remark | [20081124 db] this Variation was previously named hw47172 | ||||
Method | WGS_Hawaiian_Waterston |