WormBase Tree Display for Variation: WBVar00180580
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| WBVar00180580 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00180580 | |||
| Other_name | haw47856 | ||||
| cewivar00198704 | |||||
| C18D11.4a.1:c.722+92C>A | |||||
| C18D11.4b.1:c.227+92C>A | |||||
| HGVSg | CHROMOSOME_III:g.11830273C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C18D11 | |
| Flanking_sequences | tttctgctgaaattcaatatatttt | agattgtgaaaactaaaaatttgac | |||
| Mapping_target | C18D11 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01336000 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004705 | |||
| Transcript | C18D11.4b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18D11.4b.1:c.227+92C>A | ||||
| Intron_number | 1/1 | ||||
| C18D11.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C18D11.4a.1:c.722+92C>A | ||||
| Intron_number | 5/6 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw47856 | ||||
| Method | WGS_Hawaiian_Waterston |
