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WormBase Tree Display for Variation: WBVar00180914

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Name Class

WBVar00180914EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00180914
Other_namehaw48190
haw146807
cewivar00026903
Y79H2A.3a.1:c.5253+341A>G
Y79H2A.3e.1:c.5217+341A>G
Y79H2A.3g.1:c.3327+341A>G
Y79H2A.3d.1:c.5232+341A>G
HGVSgCHROMOSOME_III:g.12033824T>C
Sequence_detailsSMapS_parentSequenceY79H2A
Flanking_sequencesattgtgacattctataaaaaattgattttttttgtttttccgctgtttct
Mapping_targetY79H2A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00566672
StatusLive
AffectsGeneWBGene00013580
TranscriptY79H2A.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3e.1:c.5217+341A>G
Intron_number25/28
Y79H2A.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3g.1:c.3327+341A>G
Intron_number14/16
Y79H2A.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3d.1:c.5232+341A>G
Intron_number26/29
Y79H2A.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3a.1:c.5253+341A>G
Intron_number26/29
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw48190
MethodWGS_Hawaiian_Waterston