WormBase Tree Display for Variation: WBVar00181517

WBVar00181517 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00181517
    Other_name: pas31179
      haw48793
      cewivar00028422
      Y49E10.11c.1:c.*151T>C
      Y49E10.11a.2:c.3198-1361T>C
      Y49E10.11a.1:c.3198-1361T>C
    HGVSg: CHROMOSOME_III:g.12401531A>G
  Sequence_details: SMap: S_parent: Sequence: Y49E10
    Flanking_sequences: ttatgattatgacgaattgcagaga caatgcaagaggattactgtagaat
    Mapping_target: Y49E10
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (28)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01337588
        WBVar01272729
        WBVar00219403
    Status: Live
  Affects: Gene: WBGene00013034
    Transcript: Y49E10.11c.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11c.1:c.*151T>C
        cDNA_position: 3885
        Exon_number: 19/21
      Y49E10.11a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.2:c.3198-1361T>C
        Intron_number: 16/18
      Y49E10.11a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y49E10.11a.1:c.3198-1361T>C
        Intron_number: 17/19
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw48793
  Method: WGS_Hawaiian_Waterston