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WormBase Tree Display for Variation: WBVar00181527

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Name Class

WBVar00181527NamePublic_nameWBVar00181527
Other_namehaw48803
Y49E10.11a.2:c.1888-366G>A
Y49E10.11c.1:c.1888-366G>A
Y49E10.11b.1:c.1888-366G>A
Y49E10.11a.1:c.1888-366G>A
HGVSgCHROMOSOME_III:g.12410585C>T
Sequence_detailsSMapS_parentSequenceY49E10
Flanking_sequencesttatcgatttttgacttggatatagttcgggaatccactgaacatttgtt
Mapping_targetY49E10
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00013034
TranscriptY49E10.11c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11c.1:c.1888-366G>A
Intron_number11/20
Y49E10.11b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11b.1:c.1888-366G>A
Intron_number9/15
Y49E10.11a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.2:c.1888-366G>A
Intron_number10/18
Y49E10.11a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY49E10.11a.1:c.1888-366G>A
Intron_number11/19
Remark[20081124 db] this Variation was previously named hw48803
MethodWGS_Hawaiian_Waterston