WormBase Tree Display for Variation: WBVar00181527
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WBVar00181527 | Name | Public_name | WBVar00181527 | ||
---|---|---|---|---|---|
Other_name | haw48803 | ||||
Y49E10.11a.2:c.1888-366G>A | |||||
Y49E10.11c.1:c.1888-366G>A | |||||
Y49E10.11b.1:c.1888-366G>A | |||||
Y49E10.11a.1:c.1888-366G>A | |||||
HGVSg | CHROMOSOME_III:g.12410585C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | |
Flanking_sequences | ttatcgatttttgacttggatatag | ttcgggaatccactgaacatttgtt | |||
Mapping_target | Y49E10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00013034 | |||
Transcript | Y49E10.11c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11c.1:c.1888-366G>A | ||||
Intron_number | 11/20 | ||||
Y49E10.11b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11b.1:c.1888-366G>A | ||||
Intron_number | 9/15 | ||||
Y49E10.11a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11a.2:c.1888-366G>A | ||||
Intron_number | 10/18 | ||||
Y49E10.11a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y49E10.11a.1:c.1888-366G>A | ||||
Intron_number | 11/19 | ||||
Remark | [20081124 db] this Variation was previously named hw48803 | ||||
Method | WGS_Hawaiian_Waterston |