WormBase Tree Display for Variation: WBVar00182700
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WBVar00182700 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00182700 | |||
Other_name | haw49976 | ||||
haw148103 | |||||
cewivar00199998 | |||||
Y76A2B.1c.2:c.2984-85A>G | |||||
Y76A2B.1a.1:c.2852-85A>G | |||||
Y76A2B.1b.1:c.2984-85A>G | |||||
Y76A2B.1d.1:c.2852-85A>G | |||||
Y76A2B.1d.2:c.2852-85A>G | |||||
Y76A2B.1c.1:c.2984-85A>G | |||||
HGVSg | CHROMOSOME_III:g.13517019T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T28A8 | |
Flanking_sequences | atgatgatttcggcagagaaaaaat | agttcttcaatttaaacattttttt | |||
Mapping_target | T28A8 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00567968 | |||
Status | Live | ||||
Affects | Gene | WBGene00004075 | |||
Transcript | Y76A2B.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1a.1:c.2852-85A>G | ||||
Intron_number | 6/8 | ||||
Y76A2B.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1d.1:c.2852-85A>G | ||||
Intron_number | 6/9 | ||||
Y76A2B.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1c.1:c.2984-85A>G | ||||
Intron_number | 7/10 | ||||
Y76A2B.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1b.1:c.2984-85A>G | ||||
Intron_number | 7/9 | ||||
Y76A2B.1d.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1d.2:c.2852-85A>G | ||||
Intron_number | 5/7 | ||||
Y76A2B.1c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y76A2B.1c.2:c.2984-85A>G | ||||
Intron_number | 6/9 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw49976 | ||||
Method | WGS_Hawaiian_Waterston |