WormBase Tree Display for Variation: WBVar00182971
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WBVar00182971 | Name | Public_name | WBVar00182971 | ||
---|---|---|---|---|---|
Other_name | haw50247 | ||||
cewivar00200276 | |||||
Y55F3BR.6a.1:c.-20+37G>A | |||||
Y55F3BR.6b.1:c.200+37G>A | |||||
Y55F3BR.6a.2:c.-20+37G>A | |||||
HGVSg | CHROMOSOME_IV:g.841772C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y55F3BR | |
Flanking_sequences | aaaatcggtcaaaaagtgtattttt | cggaaattttttatttttcaacttt | |||
Mapping_target | Y55F3BR | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021943 | |||
Transcript | Y55F3BR.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.6a.1:c.-20+37G>A | ||||
Intron_number | 2/7 | ||||
Y55F3BR.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.6b.1:c.200+37G>A | ||||
Intron_number | 2/5 | ||||
Y55F3BR.6a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y55F3BR.6a.2:c.-20+37G>A | ||||
Intron_number | 2/7 | ||||
Remark | [20081124 db] this Variation was previously named hw50247 | ||||
Method | WGS_Hawaiian_Waterston |