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WormBase Tree Display for Variation: WBVar00182971

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Name Class

WBVar00182971NamePublic_nameWBVar00182971
Other_namehaw50247
cewivar00200276
Y55F3BR.6a.1:c.-20+37G>A
Y55F3BR.6b.1:c.200+37G>A
Y55F3BR.6a.2:c.-20+37G>A
HGVSgCHROMOSOME_IV:g.841772C>T
Sequence_detailsSMapS_parentSequenceY55F3BR
Flanking_sequencesaaaatcggtcaaaaagtgtatttttcggaaattttttatttttcaacttt
Mapping_targetY55F3BR
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021943
TranscriptY55F3BR.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6a.1:c.-20+37G>A
Intron_number2/7
Y55F3BR.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6b.1:c.200+37G>A
Intron_number2/5
Y55F3BR.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55F3BR.6a.2:c.-20+37G>A
Intron_number2/7
Remark[20081124 db] this Variation was previously named hw50247
MethodWGS_Hawaiian_Waterston