WormBase Tree Display for Variation: WBVar00183005

WBVar00183005 Evidence: Paper_evidence: WBPaper00038208
  Name: Public_name: WBVar00183005
    Other_name: haw50281
      haw148316
      cewivar00200324
      Y55F3BR.2b.1:c.224-385T>C
      Y55F3BR.2a.1:c.1103-385T>C
      Y55F3BR.12:n.88T>C
    HGVSg: CHROMOSOME_IV:g.862837T>C
  Sequence_details: SMap: S_parent: Sequence: Y55F3BR
    Flanking_sequences: gcgggacccgaaaaagagggaagta gtcatgtttgtacttattttgaagc
    Mapping_target: Y55F3BR
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00568181
    Status: Live
  Affects: Gene: WBGene00021939
      WBGene00195533
    Transcript: Y55F3BR.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3BR.2b.1:c.224-385T>C
        Intron_number: 1/15
      Y55F3BR.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3BR.2a.1:c.1103-385T>C
        Intron_number: 9/24
      Y55F3BR.12 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y55F3BR.12:n.88T>C
        cDNA_position: 88
        Exon_number: 1/1
  Reference: WBPaper00038208
  Remark: [20081124 db] this Variation was previously named hw50281
  Method: WGS_Hawaiian_Waterston